Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap99A0A140LIX9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Gm5687-201ENSMUST00000118252 640 ntBASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Gm19309-201ENSMUST00000218295 205 ntBASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap99A0A140LIX9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap99A0A140LIX9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Gm1335-201ENSMUST00000121653 386 ntBASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap99A0A140LIX9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms