Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Gm6983-201ENSMUST00000214912 628 ntBASIC12.42□□□□□ -0.42
Cldn6Q9Z262 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Gm15823-201ENSMUST00000064305 670 ntBASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn6Q9Z262 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm6447-201ENSMUST00000118905 835 ntBASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.41□□□□□ -0.42
Cldn6Q9Z262 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn6Q9Z262 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm15429-201ENSMUST00000151268 798 ntBASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm44397-201ENSMUST00000195950 113 ntBASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Gm45668-201ENSMUST00000211271 493 ntBASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn6Q9Z262 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms