Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm649-201ENSMUST00000117284 1054 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm3344-201ENSMUST00000169610 603 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm22121-201ENSMUST00000175148 54 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm8099-201ENSMUST00000200510 742 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm3786-201ENSMUST00000202659 378 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SrfQ9JM73 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.5□□□□□ -0.41
SrfQ9JM73 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm37002-201ENSMUST00000194560 373 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm38317-201ENSMUST00000195564 343 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm19208-201ENSMUST00000213861 912 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.49□□□□□ -0.41
SrfQ9JM73 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SrfQ9JM73 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SrfQ9JM73 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.48□□□□□ -0.41
SrfQ9JM73 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SrfQ9JM73 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SrfQ9JM73 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms