Protein–RNA interactions for Protein: Q9ESC8

Aff4, AF4/FMR2 family member 4, mousemouse

Predictions only

Length 1,160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff4Q9ESC8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm14928-201ENSMUST00000120198 477 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm38144-201ENSMUST00000192790 465 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aff4Q9ESC8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Mir7654-201ENSMUST00000185082 70 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm18018-201ENSMUST00000198273 408 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aff4Q9ESC8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Aff4Q9ESC8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms