Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm15678-201ENSMUST00000117573 960 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gm12428-201ENSMUST00000119844 727 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gm33320-201ENSMUST00000192232 530 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Chchd1-203ENSMUST00000224633 557 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim13Q9CYB0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm13365-201ENSMUST00000121188 973 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm8927-201ENSMUST00000181978 981 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm3222-201ENSMUST00000071282 990 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms