Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm12601-201ENSMUST00000118994 846 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm22764-201ENSMUST00000158370 92 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm37469-201ENSMUST00000193728 890 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 AC118006.2-201ENSMUST00000224167 962 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retreg3Q9CQV4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm25653-201ENSMUST00000158473 138 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm37466-201ENSMUST00000195692 652 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm18307-201ENSMUST00000206864 949 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.53□□□□□ -0.24
Retreg3Q9CQV4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retreg3Q9CQV4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Mir669o-201ENSMUST00000103898 96 ntBASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms