Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sec61bQ9CQS8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm22552-201ENSMUST00000157796 337 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm42693-201ENSMUST00000196779 631 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm6013-201ENSMUST00000212264 699 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 AC159896.2-201ENSMUST00000214753 269 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 AC154319.1-201ENSMUST00000216330 312 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 AL589735.1-201ENSMUST00000224353 270 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm38227-201ENSMUST00000193036 1602 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC7.22□□□□□ -1.25
Sec61bQ9CQS8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms