Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.71□□□□□ -0.22
Col25a1Q99MQ5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col25a1Q99MQ5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col25a1Q99MQ5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col25a1Q99MQ5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col25a1Q99MQ5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Gm10434-201ENSMUST00000101158 471 ntBASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col25a1Q99MQ5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm27552-201ENSMUST00000183351 62 ntBASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm27844-201ENSMUST00000183613 62 ntBASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col25a1Q99MQ5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms