Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tlr3Q99MB1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm6007-201ENSMUST00000208170 823 ntBASIC14.23□□□□□ -0.13
Tlr3Q99MB1 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.23□□□□□ -0.13
Tlr3Q99MB1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.23□□□□□ -0.13
Tlr3Q99MB1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm12742-201ENSMUST00000117326 410 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm17794-201ENSMUST00000220252 955 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tlr3Q99MB1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms