Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Mir686-201ENSMUST00000102174 109 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm42627-201ENSMUST00000197347 224 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm10608-202ENSMUST00000213924 676 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Mir433-201ENSMUST00000093564 124 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gm8213-201ENSMUST00000118191 441 ntBASIC11.62□□□□□ -0.55
Scrt1Q99M85 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gm10268-201ENSMUST00000085340 555 ntBASIC11.62□□□□□ -0.55
Scrt1Q99M85 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.62□□□□□ -0.55
Scrt1Q99M85 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scrt1Q99M85 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.62□□□□□ -0.55
Scrt1Q99M85 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scrt1Q99M85 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms