Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps36Q91XD6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm18307-201ENSMUST00000206864 949 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Gm26315-201ENSMUST00000083890 321 ntBASIC14.3□□□□□ -0.12
Vps36Q91XD6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps36Q91XD6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Mir6977-201ENSMUST00000184960 64 ntBASIC14.29□□□□□ -0.12
Vps36Q91XD6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.29□□□□□ -0.12
Vps36Q91XD6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps36Q91XD6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.28□□□□□ -0.12
Vps36Q91XD6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps36Q91XD6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms