Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm12203-201ENSMUST00000118235 598 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm12209-201ENSMUST00000120089 596 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.68□□□□□ -0.22
Usp3Q91W36 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.68□□□□□ -0.22
Usp3Q91W36 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp3Q91W36 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp3Q91W36 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm11425-201ENSMUST00000119608 498 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm14776-201ENSMUST00000121029 887 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Mir7085-201ENSMUST00000184353 66 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm18062-201ENSMUST00000208020 547 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm18055-201ENSMUST00000208254 547 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm18377-201ENSMUST00000215141 607 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm9396-201ENSMUST00000076703 567 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.67□□□□□ -0.22
Usp3Q91W36 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp3Q91W36 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp3Q91W36 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.66□□□□□ -0.22
Usp3Q91W36 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.66□□□□□ -0.22
Usp3Q91W36 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Usp3Q91W36 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp3Q91W36 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms