Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Pck2-205ENSMUST00000226352 2784 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gm24196-201ENSMUST00000179161 110 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gm29649-201ENSMUST00000185649 419 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gm29127-201ENSMUST00000188304 517 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.22■□□□□ 0.03
Ddx41Q91VN6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx41Q91VN6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Gm2445-201ENSMUST00000182798 989 ntBASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Gm45784-201ENSMUST00000188360 142 ntBASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Gm18473-201ENSMUST00000220543 868 ntBASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx41Q91VN6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx41Q91VN6 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm12957-201ENSMUST00000117835 377 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm14660-201ENSMUST00000119809 575 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx41Q91VN6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms