Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm15703-201ENSMUST00000120250 880 ntBASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm11246-201ENSMUST00000120880 345 ntBASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.34■□□□□ 0.05
StrcQ8VIM6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm807-202ENSMUST00000224929 408 ntBASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm5455-201ENSMUST00000058710 715 ntBASIC15.34■□□□□ 0.05
StrcQ8VIM6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
StrcQ8VIM6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Gm45398-201ENSMUST00000210561 165 ntBASIC15.33■□□□□ 0.05
StrcQ8VIM6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.33■□□□□ 0.05
StrcQ8VIM6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.33■□□□□ 0.05
StrcQ8VIM6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
StrcQ8VIM6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Gm11509-201ENSMUST00000117358 325 ntBASIC15.33■□□□□ 0.04
StrcQ8VIM6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.33■□□□□ 0.04
StrcQ8VIM6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.33■□□□□ 0.04
StrcQ8VIM6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
StrcQ8VIM6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm11340-201ENSMUST00000119226 412 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Mir1956-201ENSMUST00000157748 65 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm6485-201ENSMUST00000160676 439 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm34023-201ENSMUST00000195539 217 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm18893-201ENSMUST00000198416 943 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms