Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.1□□□□□ -0.15
TraipQ8VIG6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm12363-201ENSMUST00000122250 668 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm6222-202ENSMUST00000182143 629 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm3961-201ENSMUST00000204425 994 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 AC173482.3-201ENSMUST00000225492 1212 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm9823-201ENSMUST00000051212 327 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.09□□□□□ -0.15
TraipQ8VIG6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TraipQ8VIG6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TraipQ8VIG6 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.08□□□□□ -0.15
TraipQ8VIG6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.08□□□□□ -0.16
TraipQ8VIG6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.08□□□□□ -0.16
TraipQ8VIG6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.08□□□□□ -0.16
TraipQ8VIG6 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.08□□□□□ -0.16
TraipQ8VIG6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms