Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm1Q8VC85 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm12151-201ENSMUST00000121374 290 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm24694-201ENSMUST00000180054 110 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Mir7684-201ENSMUST00000183858 60 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm27663-201ENSMUST00000184839 110 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm1Q8VC85 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Gm14719-201ENSMUST00000121891 340 ntBASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.71□□□□□ -0.37
Lsm1Q8VC85 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm1Q8VC85 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm1Q8VC85 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms