Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdt1Q8R4E9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.88□□□□□ -0.35
Cdt1Q8R4E9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm26464-201ENSMUST00000157094 305 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdt1Q8R4E9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdt1Q8R4E9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms