Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Clrn1Q8K445 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm44397-201ENSMUST00000195950 113 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.5□□□□□ -0.41
Clrn1Q8K445 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn1Q8K445 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.49□□□□□ -0.41
Clrn1Q8K445 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Gm9908-201ENSMUST00000211534 448 ntBASIC12.49□□□□□ -0.41
Clrn1Q8K445 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.49□□□□□ -0.41
Clrn1Q8K445 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms