Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm14208-201ENSMUST00000119645 678 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm26361-201ENSMUST00000158868 186 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm43947-201ENSMUST00000203019 959 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm22334-201ENSMUST00000158070 133 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm24514-201ENSMUST00000174961 285 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.9□□□□□ -0.02
Syne4Q8CII8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.9□□□□□ -0.02
Syne4Q8CII8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm14109-201ENSMUST00000118814 309 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm13875-201ENSMUST00000120162 282 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm3096-201ENSMUST00000185770 364 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm44262-201ENSMUST00000204969 372 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms