Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gm17208-201ENSMUST00000168388 535 ntBASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gm38266-201ENSMUST00000194931 421 ntBASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gm3961-201ENSMUST00000204425 994 ntBASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip3Q8CHD8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Rab11fip3Q8CHD8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Gm6222-202ENSMUST00000182143 629 ntBASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Gm5781-201ENSMUST00000219792 443 ntBASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Rubie-203ENSMUST00000227803 2430 ntBASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip3Q8CHD8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gm18935-201ENSMUST00000212692 664 ntBASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms