Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Gm27680-201ENSMUST00000184192 160 ntBASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Calcoco1Q8CGU1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm27306-201ENSMUST00000183970 107 ntBASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm16476-201ENSMUST00000221544 139 ntBASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Calcoco1Q8CGU1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Gm27989-201ENSMUST00000184721 107 ntBASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Gm9063-201ENSMUST00000223299 582 ntBASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Calcoco1Q8CGU1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms