Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm27430-201ENSMUST00000184585 107 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm37230-201ENSMUST00000194491 818 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gm44333-201ENSMUST00000197168 107 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tsen54Q8C2A2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms