Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sfr1Q8BP27 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sfr1Q8BP27 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sfr1Q8BP27 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm26315-201ENSMUST00000083890 321 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms