Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Gm46209-201ENSMUST00000217912 553 ntBASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim6Q8BGE7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim6Q8BGE7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Mir874-201ENSMUST00000104769 76 ntBASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm27622-201ENSMUST00000183779 60 ntBASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim6Q8BGE7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm15693-201ENSMUST00000120470 637 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm10766-202ENSMUST00000194123 606 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.07□□□□□ -0.16
Trim6Q8BGE7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms