Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gm14921-201ENSMUST00000118643 908 ntBASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gm19994-201ENSMUST00000217086 586 ntBASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup98Q6PFD9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm13315-201ENSMUST00000120376 991 ntBASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm44967-201ENSMUST00000207047 631 ntBASIC15.34■□□□□ 0.05
Nup98Q6PFD9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup98Q6PFD9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Gm2260-201ENSMUST00000184965 657 ntBASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Nup98Q6PFD9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm11597-201ENSMUST00000121423 964 ntBASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm24845-201ENSMUST00000158034 109 ntBASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Gm27341-201ENSMUST00000183570 106 ntBASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms