Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Gm10179-201ENSMUST00000086233 688 ntBASIC15.28■□□□□ 0.04
Scn9aQ62205 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.28■□□□□ 0.04
Scn9aQ62205 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Mir339-201ENSMUST00000083659 96 ntBASIC15.27■□□□□ 0.04
Scn9aQ62205 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn9aQ62205 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn9aQ62205 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Gm7600-201ENSMUST00000209657 785 ntBASIC15.27■□□□□ 0.03
Scn9aQ62205 Gm45925-201ENSMUST00000218882 744 ntBASIC15.27■□□□□ 0.03
Scn9aQ62205 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn9aQ62205 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn9aQ62205 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm6407-201ENSMUST00000176468 549 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Mir6958-201ENSMUST00000184207 73 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm8365-201ENSMUST00000197334 648 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scn9aQ62205 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.26■□□□□ 0.03
Scn9aQ62205 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn9aQ62205 Gm9062-201ENSMUST00000117712 727 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms