Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccne1Q61457 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccne1Q61457 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccne1Q61457 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccne1Q61457 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccne1Q61457 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.14■□□□□ 0.34
Ccne1Q61457 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.14■□□□□ 0.34
Ccne1Q61457 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccne1Q61457 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.14■□□□□ 0.33
Ccne1Q61457 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.14■□□□□ 0.33
Ccne1Q61457 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm10434-201ENSMUST00000101158 471 ntBASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm14704-201ENSMUST00000120300 874 ntBASIC17.14■□□□□ 0.33
Ccne1Q61457 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccne1Q61457 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccne1Q61457 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccne1Q61457 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccne1Q61457 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.13■□□□□ 0.33
Ccne1Q61457 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccne1Q61457 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.12■□□□□ 0.33
Ccne1Q61457 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm14726-201ENSMUST00000120623 896 ntBASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ccne1Q61457 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.12■□□□□ 0.33
Ccne1Q61457 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ccne1Q61457 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.12■□□□□ 0.33
Ccne1Q61457 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccne1Q61457 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms