Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vsx2Q61412 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vsx2Q61412 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.93□□□□□ -0.34
Vsx2Q61412 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.93□□□□□ -0.34
Vsx2Q61412 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vsx2Q61412 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vsx2Q61412 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.93□□□□□ -0.34
Vsx2Q61412 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vsx2Q61412 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 Gm27701-201ENSMUST00000184498 110 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Gm28911-201ENSMUST00000188837 117 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 Gm44719-201ENSMUST00000206404 149 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.92□□□□□ -0.34
Vsx2Q61412 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vsx2Q61412 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.92□□□□□ -0.34
Vsx2Q61412 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.91□□□□□ -0.34
Vsx2Q61412 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.91□□□□□ -0.34
Vsx2Q61412 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms