Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.36□□□□□ -0.27
Six4Q61321 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Six4Q61321 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Six4Q61321 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.36□□□□□ -0.27
Six4Q61321 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.35□□□□□ -0.27
Six4Q61321 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Mir874-201ENSMUST00000104769 76 ntBASIC13.35□□□□□ -0.27
Six4Q61321 Gm8213-201ENSMUST00000118191 441 ntBASIC13.35□□□□□ -0.27
Six4Q61321 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.35□□□□□ -0.27
Six4Q61321 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gm8602-201ENSMUST00000184045 607 ntBASIC13.35□□□□□ -0.27
Six4Q61321 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.35□□□□□ -0.27
Six4Q61321 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Six4Q61321 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Six4Q61321 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.35□□□□□ -0.27
Six4Q61321 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six4Q61321 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.34□□□□□ -0.27
Six4Q61321 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Gm12203-201ENSMUST00000118235 598 ntBASIC13.34□□□□□ -0.27
Six4Q61321 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.34□□□□□ -0.27
Six4Q61321 Gm12209-201ENSMUST00000120089 596 ntBASIC13.34□□□□□ -0.27
Six4Q61321 Gm13123-201ENSMUST00000122173 492 ntBASIC13.34□□□□□ -0.27
Six4Q61321 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.34□□□□□ -0.27
Six4Q61321 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 Gm7561-201ENSMUST00000211203 886 ntBASIC13.34□□□□□ -0.27
Six4Q61321 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.34□□□□□ -0.27
Six4Q61321 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Six4Q61321 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Gm6091-201ENSMUST00000098307 165 ntBASIC13.34□□□□□ -0.27
Six4Q61321 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.34□□□□□ -0.27
Six4Q61321 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.34□□□□□ -0.27
Six4Q61321 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Six4Q61321 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Six4Q61321 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms