Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.51□□□□□ -0.09
Col11a1Q61245 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.51□□□□□ -0.09
Col11a1Q61245 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col11a1Q61245 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.51□□□□□ -0.09
Col11a1Q61245 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col11a1Q61245 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col11a1Q61245 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm12314-201ENSMUST00000118104 538 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm7666-201ENSMUST00000146631 819 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm27530-201ENSMUST00000184096 98 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a1Q61245 Rmrp-201ENSMUST00000157463 271 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm28882-201ENSMUST00000185504 314 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Gm1821-202ENSMUST00000227415 750 ntBASIC14.5□□□□□ -0.09
Col11a1Q61245 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a1Q61245 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Col11a1Q61245 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm14058-201ENSMUST00000116082 735 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col11a1Q61245 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms