Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm5687-201ENSMUST00000118252 640 ntBASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm9002-201ENSMUST00000178437 499 ntBASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm5356-201ENSMUST00000093326 615 ntBASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zfp560Q3URI6 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.3□□□□□ -0.28
Zfp560Q3URI6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Gm15806-201ENSMUST00000120696 955 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Gm38671-201ENSMUST00000200573 130 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zfp560Q3URI6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm11478-201ENSMUST00000117851 599 ntBASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm7287-201ENSMUST00000205267 602 ntBASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.28□□□□□ -0.28
Zfp560Q3URI6 Gm45841-201ENSMUST00000207700 164 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms