Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm12165-201ENSMUST00000117047 342 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm11450-201ENSMUST00000121144 333 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm6963-201ENSMUST00000147879 379 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm29155-201ENSMUST00000185910 269 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm38210-201ENSMUST00000191944 809 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm25517-201ENSMUST00000083865 134 ntBASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col19a1Q0VF58 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm6580-201ENSMUST00000117504 1357 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14□□□□□ -0.17
Col19a1Q0VF58 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14□□□□□ -0.17
Col19a1Q0VF58 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm7666-201ENSMUST00000146631 819 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm6254-201ENSMUST00000168178 1072 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm17391-201ENSMUST00000171036 126 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Rn7s6-201ENSMUST00000175005 291 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14□□□□□ -0.17
Col19a1Q0VF58 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm19287-201ENSMUST00000203190 358 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14□□□□□ -0.17
Col19a1Q0VF58 AC174797.2-202ENSMUST00000225729 568 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Gm43273-201ENSMUST00000199649 2594 ntBASIC14□□□□□ -0.17
Col19a1Q0VF58 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col19a1Q0VF58 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Col19a1Q0VF58 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col19a1Q0VF58 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms