Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm9794-201ENSMUST00000202370 423 ntBASIC13.51□□□□□ -0.25
Thumpd3P97770 Gm7653-201ENSMUST00000214567 508 ntBASIC13.51□□□□□ -0.25
Thumpd3P97770 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.5□□□□□ -0.25
Thumpd3P97770 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.5□□□□□ -0.25
Thumpd3P97770 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm14928-201ENSMUST00000120198 477 ntBASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.5□□□□□ -0.25
Thumpd3P97770 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Thumpd3P97770 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.5□□□□□ -0.25
Thumpd3P97770 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Thumpd3P97770 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thumpd3P97770 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.49□□□□□ -0.25
Thumpd3P97770 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Gm33320-201ENSMUST00000192232 530 ntBASIC13.49□□□□□ -0.25
Thumpd3P97770 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.49□□□□□ -0.25
Thumpd3P97770 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.49□□□□□ -0.25
Thumpd3P97770 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Thumpd3P97770 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.49□□□□□ -0.25
Thumpd3P97770 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thumpd3P97770 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.48□□□□□ -0.25
Thumpd3P97770 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Thumpd3P97770 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.48□□□□□ -0.25
Thumpd3P97770 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.48□□□□□ -0.25
Thumpd3P97770 Gm42612-201ENSMUST00000197986 623 ntBASIC13.48□□□□□ -0.25
Thumpd3P97770 Gm43170-201ENSMUST00000199827 612 ntBASIC13.48□□□□□ -0.25
Thumpd3P97770 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.48□□□□□ -0.25
Thumpd3P97770 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd3P97770 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms