Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hmgb1P63158 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.63□□□□□ -0.07
Hmgb1P63158 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.63□□□□□ -0.07
Hmgb1P63158 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb1P63158 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Gm15487-201ENSMUST00000122373 465 ntBASIC14.62□□□□□ -0.07
Hmgb1P63158 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Gm26464-201ENSMUST00000157094 305 ntBASIC14.62□□□□□ -0.07
Hmgb1P63158 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
Hmgb1P63158 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb1P63158 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Hmgb1P63158 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hmgb1P63158 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.61□□□□□ -0.07
Hmgb1P63158 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hmgb1P63158 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.61□□□□□ -0.07
Hmgb1P63158 Gm24694-201ENSMUST00000180054 110 ntBASIC14.61□□□□□ -0.07
Hmgb1P63158 Gm27663-201ENSMUST00000184839 110 ntBASIC14.61□□□□□ -0.07
Hmgb1P63158 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.61□□□□□ -0.07
Hmgb1P63158 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hmgb1P63158 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.61□□□□□ -0.07
Hmgb1P63158 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb1P63158 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Gm15920-201ENSMUST00000118998 402 ntBASIC14.6□□□□□ -0.07
Hmgb1P63158 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.6□□□□□ -0.07
Hmgb1P63158 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.6□□□□□ -0.07
Hmgb1P63158 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.6□□□□□ -0.07
Hmgb1P63158 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgb1P63158 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb1P63158 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.6□□□□□ -0.07
Hmgb1P63158 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms