Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Rps28P62858 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Rps28P62858 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Rps28P62858 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC7.65□□□□□ -1.18
Rps28P62858 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC7.65□□□□□ -1.18
Rps28P62858 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Rps28P62858 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC7.65□□□□□ -1.18
Rps28P62858 Gm37025-201ENSMUST00000195159 829 ntBASIC7.65□□□□□ -1.18
Rps28P62858 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 AC131690.1-201ENSMUST00000218406 374 ntBASIC7.65□□□□□ -1.18
Rps28P62858 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC7.65□□□□□ -1.18
Rps28P62858 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rps28P62858 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Rps28P62858 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Rps28P62858 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rps28P62858 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC7.64□□□□□ -1.19
Rps28P62858 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC7.64□□□□□ -1.19
Rps28P62858 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm4782-201ENSMUST00000168705 2046 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Spata33-207ENSMUST00000212760 4074 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Gm37843-201ENSMUST00000195213 2639 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 AC175538.1-201ENSMUST00000225343 1269 ntBASIC7.64□□□□□ -1.19
Rps28P62858 CT009510.1-201ENSMUST00000227972 270 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC7.64□□□□□ -1.19
Rps28P62858 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Rps28P62858 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rps28P62858 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 AC156802.2-203ENSMUST00000226032 1906 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 Gm5780-201ENSMUST00000217774 1834 ntBASIC7.64□□□□□ -1.19
Rps28P62858 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rps28P62858 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms