Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.15□□□□□ -0.3
Atxn1P54254 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Gm21769-201ENSMUST00000211922 111 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Gm7046-201ENSMUST00000221351 977 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.15□□□□□ -0.3
Atxn1P54254 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atxn1P54254 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Atxn1P54254 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Atxn1P54254 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Atxn1P54254 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atxn1P54254 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Atxn1P54254 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm8584-201ENSMUST00000171982 758 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm5523-201ENSMUST00000180415 997 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Gm37497-201ENSMUST00000195830 798 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Gm8099-201ENSMUST00000200510 742 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Atxn1P54254 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.14□□□□□ -0.31
Atxn1P54254 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Atxn1P54254 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Atxn1P54254 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atxn1P54254 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms