Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfx2P48379 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Rfx2P48379 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rfx2P48379 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.9□□□□□ -0.18
Rfx2P48379 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx2P48379 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Rfx2P48379 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfx2P48379 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.89□□□□□ -0.19
Rfx2P48379 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Rfx2P48379 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rfx2P48379 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.89□□□□□ -0.19
Rfx2P48379 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rfx2P48379 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx2P48379 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Gm8213-201ENSMUST00000118191 441 ntBASIC13.88□□□□□ -0.19
Rfx2P48379 Gm12384-201ENSMUST00000119228 919 ntBASIC13.88□□□□□ -0.19
Rfx2P48379 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rfx2P48379 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rfx2P48379 Gm43818-201ENSMUST00000200605 466 ntBASIC13.88□□□□□ -0.19
Rfx2P48379 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.88□□□□□ -0.19
Rfx2P48379 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.88□□□□□ -0.19
Rfx2P48379 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rfx2P48379 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.88□□□□□ -0.19
Rfx2P48379 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rfx2P48379 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx2P48379 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rfx2P48379 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms