Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 AC151895.1-201ENSMUST00000219025 1742 ntBASIC8.91□□□□□ -0.98
Rpl28P41105 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rpl28P41105 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm4995-201ENSMUST00000117247 432 ntBASIC8.91□□□□□ -0.98
Rpl28P41105 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm3809-201ENSMUST00000180973 1006 ntBASIC8.91□□□□□ -0.98
Rpl28P41105 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.91□□□□□ -0.98
Rpl28P41105 Chchd1-203ENSMUST00000224633 557 ntBASIC8.91□□□□□ -0.98
Rpl28P41105 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC8.91□□□□□ -0.98
Rpl28P41105 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Rpl28P41105 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC8.91□□□□□ -0.98
Rpl28P41105 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rpl28P41105 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Gm44851-201ENSMUST00000205735 2309 ntBASIC8.91□□□□□ -0.98
Rpl28P41105 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl28P41105 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl28P41105 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Rpl28P41105 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC8.9□□□□□ -0.98
Rpl28P41105 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rpl28P41105 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC8.9□□□□□ -0.98
Rpl28P41105 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC8.9□□□□□ -0.98
Rpl28P41105 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rpl28P41105 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Rpl28P41105 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Mir125a-201ENSMUST00000083545 68 ntBASIC8.9□□□□□ -0.98
Rpl28P41105 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rpl28P41105 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rpl28P41105 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl28P41105 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms