Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.02□□□□□ -0.49
VtnP29788 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.02□□□□□ -0.49
VtnP29788 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm12928-201ENSMUST00000117115 573 ntBASIC12.02□□□□□ -0.49
VtnP29788 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.02□□□□□ -0.49
VtnP29788 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.02□□□□□ -0.49
VtnP29788 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.02□□□□□ -0.49
VtnP29788 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VtnP29788 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.02□□□□□ -0.49
VtnP29788 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.02□□□□□ -0.49
VtnP29788 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.02□□□□□ -0.49
VtnP29788 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VtnP29788 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.02□□□□□ -0.49
VtnP29788 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VtnP29788 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.01□□□□□ -0.49
VtnP29788 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Gm8652-201ENSMUST00000181363 964 ntBASIC12.01□□□□□ -0.49
VtnP29788 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VtnP29788 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VtnP29788 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Mypopos-202ENSMUST00000205975 2321 ntBASIC12□□□□□ -0.49
VtnP29788 Gm10040-201ENSMUST00000080726 1662 ntBASIC12□□□□□ -0.49
VtnP29788 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
VtnP29788 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12□□□□□ -0.49
VtnP29788 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
VtnP29788 Gm11400-201ENSMUST00000120853 1214 ntBASIC12□□□□□ -0.49
VtnP29788 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12□□□□□ -0.49
VtnP29788 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms