Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc6P10629 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc6P10629 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.63□□□□□ -0.07
Hoxc6P10629 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc6P10629 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc6P10629 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm5950-201ENSMUST00000213337 772 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxc6P10629 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.62□□□□□ -0.07
Hoxc6P10629 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc6P10629 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm11531-201ENSMUST00000117614 555 ntBASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm11439-201ENSMUST00000118598 409 ntBASIC14.61□□□□□ -0.07
Hoxc6P10629 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.61□□□□□ -0.07
Hoxc6P10629 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc6P10629 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc6P10629 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Hoxc6P10629 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hoxc6P10629 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Hoxc6P10629 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.6□□□□□ -0.07
Hoxc6P10629 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Gm23270-201ENSMUST00000104055 131 ntBASIC14.6□□□□□ -0.07
Hoxc6P10629 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc6P10629 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.6□□□□□ -0.07
Hoxc6P10629 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.6□□□□□ -0.07
Hoxc6P10629 Gm15276-201ENSMUST00000145953 498 ntBASIC14.6□□□□□ -0.07
Hoxc6P10629 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.6□□□□□ -0.07
Hoxc6P10629 Mir5120-201ENSMUST00000175020 78 ntBASIC14.6□□□□□ -0.07
Hoxc6P10629 AA914427-201ENSMUST00000193194 1166 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms