Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P01852 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.13□□□□□ -0.47
P01852 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
P01852 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.13□□□□□ -0.47
P01852 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.13□□□□□ -0.47
P01852 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.13□□□□□ -0.47
P01852 Gm6244-201ENSMUST00000178732 841 ntBASIC12.13□□□□□ -0.47
P01852 Gm7287-201ENSMUST00000205267 602 ntBASIC12.13□□□□□ -0.47
P01852 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.13□□□□□ -0.47
P01852 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.13□□□□□ -0.47
P01852 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
P01852 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P01852 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P01852 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P01852 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P01852 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.12□□□□□ -0.47
P01852 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.12□□□□□ -0.47
P01852 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P01852 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.12□□□□□ -0.47
P01852 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.12□□□□□ -0.47
P01852 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P01852 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.12□□□□□ -0.47
P01852 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.12□□□□□ -0.47
P01852 Gm26315-201ENSMUST00000083890 321 ntBASIC12.12□□□□□ -0.47
P01852 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P01852 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01852 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
P01852 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.12□□□□□ -0.47
P01852 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01852 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.12□□□□□ -0.47
P01852 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P01852 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.11□□□□□ -0.47
P01852 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
P01852 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
P01852 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.11□□□□□ -0.47
P01852 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.11□□□□□ -0.47
P01852 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.11□□□□□ -0.47
P01852 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.11□□□□□ -0.47
P01852 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Gm5035-201ENSMUST00000215581 927 ntBASIC12.11□□□□□ -0.47
P01852 Gm5186-201ENSMUST00000218781 920 ntBASIC12.11□□□□□ -0.47
P01852 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms