Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Gm37153-201ENSMUST00000193637 231 ntBASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-2D3Z4R4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-2D3Z4R4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gm9682-201ENSMUST00000197505 556 ntBASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-2D3Z4R4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Gm23634-201ENSMUST00000175071 91 ntBASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-2D3Z4R4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms