Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm17271-201ENSMUST00000165535 355 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm2810-201ENSMUST00000118681 990 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm17968-201ENSMUST00000194902 784 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm44492-201ENSMUST00000197012 141 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms