Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm10175-201ENSMUST00000086013 645 ntBASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cx3cr1Q9Z0D9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm15393-201ENSMUST00000120499 219 ntBASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm9229-201ENSMUST00000222777 126 ntBASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cx3cr1Q9Z0D9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Cx3cr1Q9Z0D9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cx3cr1Q9Z0D9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms