Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm24447-201ENSMUST00000083977 338 ntBASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Gm37917-201ENSMUST00000194711 392 ntBASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClcnkaQ9WUB7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms