Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm23931-201ENSMUST00000103842 109 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm15741-201ENSMUST00000119401 754 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm8652-201ENSMUST00000181363 964 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm45078-201ENSMUST00000205343 546 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx6Q9R1R0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm13342-201ENSMUST00000121055 207 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm27514-201ENSMUST00000183692 110 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm43708-201ENSMUST00000198857 961 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 AC115357.1-201ENSMUST00000227575 466 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx6Q9R1R0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx6Q9R1R0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx6Q9R1R0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx6Q9R1R0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx6Q9R1R0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx6Q9R1R0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx6Q9R1R0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms