Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gm26315-201ENSMUST00000083890 321 ntBASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm44397-201ENSMUST00000195950 113 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.85□□□□□ -0.19
Chmp2aQ9DB34 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm5356-201ENSMUST00000093326 615 ntBASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2aQ9DB34 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.83□□□□□ -0.19
Chmp2aQ9DB34 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.83□□□□□ -0.19
Chmp2aQ9DB34 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms