Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Trav13-3-201ENSMUST00000117226 336 ntBASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm27618-201ENSMUST00000183671 60 ntBASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm6159-201ENSMUST00000191249 1724 ntBASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm11839-201ENSMUST00000120647 1953 ntBASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC8.84□□□□□ -1
Mrpl55Q9CZ83 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Mrpl55Q9CZ83 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Mrpl55Q9CZ83 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm13015-201ENSMUST00000118674 204 ntBASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm27321-201ENSMUST00000185021 205 ntBASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm18766-201ENSMUST00000189811 808 ntBASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Mrpl55Q9CZ83 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms