Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm12882-201ENSMUST00000121696 517 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm6458-201ENSMUST00000211573 635 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm19640-201ENSMUST00000214849 464 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Gm12948-201ENSMUST00000119406 682 ntBASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col25a1Q99MQ5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm12029-201ENSMUST00000120073 832 ntBASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm43610-201ENSMUST00000199117 365 ntBASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm9555-201ENSMUST00000200908 583 ntBASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.71□□□□□ -0.21
Col25a1Q99MQ5 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms