Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.33■□□□□ 0.04
Smc1bQ920F6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm42627-201ENSMUST00000197347 224 ntBASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm43118-201ENSMUST00000199149 775 ntBASIC15.33■□□□□ 0.04
Smc1bQ920F6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.33■□□□□ 0.04
Smc1bQ920F6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.33■□□□□ 0.04
Smc1bQ920F6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc1bQ920F6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.32■□□□□ 0.04
Smc1bQ920F6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Gm15808-201ENSMUST00000119046 604 ntBASIC15.32■□□□□ 0.04
Smc1bQ920F6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.32■□□□□ 0.04
Smc1bQ920F6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Gm37008-201ENSMUST00000195712 319 ntBASIC15.32■□□□□ 0.04
Smc1bQ920F6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc1bQ920F6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm22018-201ENSMUST00000104357 131 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm8213-201ENSMUST00000118191 441 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm43758-201ENSMUST00000199500 367 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc1bQ920F6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.31■□□□□ 0.04
Smc1bQ920F6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms